PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003747-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WOX
Protein Properties Length: 287aa    MW: 31821.4 Da    PI: 5.1583
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003747-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox664.9e-21103163257
                     T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                     r+R+t+t+ ql++Le+ F + + +ps+++++e++ +l    +++e++V++WFqNrRa+ k+
  AUR62003747-RA 103 RQRWTPTPVQLQILERIFDQgTGTPSKQKIKEITIELsqhgQISETNVYNWFQNRRARSKR 163
                     89*****************99**************************************97 PP
2Wus_type_Homeobox102.53e-33102165265
  Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ar+RWtPtp Q++iLe+++++G+ tP+k++i++it eL+++G+i+++NV++WFQNr+aR+++kq
     AUR62003747-RA 102 ARQRWTPTPVQLQILERIFDQGTGTPSKQKIKEITIELSQHGQISETNVYNWFQNRRARSKRKQ 165
                        789***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MMDPQQIPPQ LPPHDAGNGL MNGGVDGNAS NNGGINGVLY VKVMTDEQLE ILRTQIAVYA  60
TICEQLVDMH KAITAQQDLA GVRLGNMYCD PLVTAMGHKI TARQRWTPTP VQLQILERIF  120
DQGTGTPSKQ KIKEITIELS QHGQISETNV YNWFQNRRAR SKRKQLNNNA QNNAESEVET  180
DAESPKDKKT KPEDFQSQPN SMLRTDDSCF QNQEMSSSMH TIDSQSGKMD SVFASDGSSK  240
SSQSLSHLGF YESIMHNPRI DDLIGKIEVP GSYNSYQSTE DYSMTG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157165RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.16e-88WOX family protein