PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003761-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MIKC_MADS
Protein Properties Length: 265aa    MW: 28967.6 Da    PI: 5.5702
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003761-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.53.7e-28958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvtfskRrng++KKA+ELS+LCd+++a+i+fs++g+l  +s
  AUR62003761-RA  9 KRIENNTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHFS 58
                    79********************************************9997 PP
2K-box27.99.7e-11841521078
           K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqie 78 
                     ++++ e lqqe+++L+ ++++ + ++R +  + +   s+ eL++ e++L ++l+++ ++K+ ll ++++
  AUR62003761-RA  84 CNSNLEDLQQEVNNLQHQLQMAEDQLRIYEPDPMAFTSIGELESCEKNLIDALSHVSQRKKYLLSNHMS 152
                     68999***********************************************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MGRVKLQIKR IENNTNRQVT FSKRRNGLIK KAYELSILCD IDIALIMFSP SGRLSHFSGR  60
KRIEDVLTRY INLPDHDRGN PGGCNSNLED LQQEVNNLQH QLQMAEDQLR IYEPDPMAFT  120
SIGELESCEK NLIDALSHVS QRKKYLLSNH MSSYDPSGVQ IFLDTSEGMP TSFEDIGWLP  180
ESGHNQGQIF TSSDPSNTIA MRGAAGVGGA ASAMVTGQQV EAIPATMGCG IVEIGVGGHI  240
QCSEDASATS ASNFDHKIPQ LNMQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.17e-77MIKC_MADS family protein