PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003776-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 225aa    MW: 25124.2 Da    PI: 8.0923
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003776-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.69.6e-214090256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                     y+GVr+++ +g+WvAeIr p++   r+r +lg+f taeeAa a+++a+ kl+ge
  AUR62003776-RA 40 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFETAEEAALAYDNAAYKLRGE 90
                    59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MGIPQNPSIQ LPPSSSSNYR TNHLLSPKPT LMKQNKSTKL YRGVRQRHWG KWVAEIRLPK  60
NRTRLWLGTF ETAEEAALAY DNAAYKLRGE FARLNLPHIK HHGAYVTTQF GHYKPLHSTV  120
NAKLEAICQS LDISLKQGKT EEPCFSPVSS SVSYQIEENA SSSSSQVLVP KAEVLPVVSD  180
DSSTNSCSPE SGVTFIDFTE SSWDEFNSFS LNKFPSFEID WANI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.19e-59ERF family protein