PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003807-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 304aa    MW: 34040.6 Da    PI: 6.547
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003807-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H224.18.9e-08106128123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C+ Cgk F+r  nL+ H+r H
  AUR62003807-RA 106 HTCQVCGKGFKRDANLRMHMRAH 128
                     79*******************99 PP
2zf-C2H216.52.4e-05230251222
                     EET.TTTEEESSHHHHHHHHHH CS
         zf-C2H2   2 kCp.dCgksFsrksnLkrHirt 22 
                     +C+  Cg++Fsrk++L  H+++
  AUR62003807-RA 230 SCKcSCGRMFSRKDELFEHMSL 251
                     59999***************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MTDPINTLHL PPPEYTASDD PLTNLTAIRN RVDSLSHILS NSVNGTAPIS INQSNSISAE  60
LSSAIHAVVI NGAALLTTSS SSTHVDGDDL EIVELDVMEL TAEHSHTCQV CGKGFKRDAN  120
LRMHMRAHGD KYKTMESLSK PDKHKHSDIY GRNTRFSCPY AGCIRNKRHQ EFRPLKSVIC  180
VKNHFKRSHC PKKFPCLGCK KKQFSVLADL KCHMKNCVAA TAVVVAEEES CKCSCGRMFS  240
RKDELFEHMS LFEGHMPVAE DDNKFDVVEE EQDDFGFGLI EGDQCLQDMD YLWSSYEKEL  300
LHF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22890.13e-59C2H2 family protein