PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62003842-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family G2-like
Protein Properties Length: 267aa    MW: 29179.2 Da    PI: 6.8783
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62003842-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.74.6e-32142197156
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                     k r++W+peLH+rFv+a+e+LGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  AUR62003842-RA 142 KRRRCWSPELHRRFVDALESLGGAQVATPKQIKELMKVDGLTNDEVKSHLQKYRLH 197
                     689***************************************************97 PP
2Myb_DNA-binding43.29.4e-14144195148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W++e++ ++vda + lGg    t+k I + m   g+t  ++ks++qky+
   AUR62003842-RA 144 RRCWSPELHRRFVDALESLGGAqvaTPKQIKELMKvDGLTNDEVKSHLQKYR 195
                      668*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MASNFPQLSL SLPNPPEVLT RFLVAGISDL GELSKLNGFI ICLEDELKKI QAFHRELPLS  60
SIIVNDGGGD YEPHKNEGKG AVLSFEKKVR EDVTGLSLVP PGLNTSLEMV EPGPAKLRTG  120
GIFSGSVFAK PAIKPSYQTT RKRRRCWSPE LHRRFVDALE SLGGAQVATP KQIKELMKVD  180
GLTNDEVKSH LQKYRLHVRK LPAASKTNQL TTDLGMDYGD QLELGCLTTD LQHSGSPKGP  240
LHLGESRKCN SSSFEEDEEE KSDGQS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141145RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49560.14e-32G2-like family protein