PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62004043-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB

Protein Properties

Length: 323aa MW: 36111.3 Da PI: 6.3605

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62004043-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.6	1.6e-14	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd l+ +++q G+g +W + + ++g++R++k+c++rw++yl AUR62004043-RA 14 KGPWSPEEDATLKAYIEQKGTGgNWIALPLKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	35.9	1.7e-11	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T++E+ ++ + G++ W+ Ia+ ++ gRt++++k++w++ AUR62004043-RA 69 GGFTEDEENIICSLYLSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDATLKAYIE QKGTGGNWIA LPLKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FTEDEENIIC SLYLSIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLMAK 120 QRKEQTACRI IEQEIKRESE TFMVNQTLNQ VPYWAEQQTS MPMMHPSLAA HHLGNQDQLT 180 RLLTKIGGQF YDDSQLINNG GSYQYPTQDQ LYVLDSSNAQ ASSAVAINST TNVNFTQWLN 240 MEYDANGVSM NIHQGQESFP PEFEAYLSNQ LRFDGNESFS GVEVGNNSST TSNSAGSSSW 300 EDMSSLVNTP ASSFDAYQNG ML*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	4e-85	MYB family protein