PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004058-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 178aa    MW: 19443.5 Da    PI: 9.0885
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004058-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA64.31.4e-205993135
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  AUR62004058-RA 59 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 93
                    ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MTNEQTNKPT PHRNSVSSFC WDLLHPKQSS SSTPKPSRSS NNHAAAASAA ADPLFVRRCA  60
NCDTTSTPLW RNGPRGPKSL CNACGIRFKK EERRAAAATT TVAAANNGPT AGMMDPHYYN  120
GSWAHQYGQG TPQKMQCYGA PNEFRFIEDD RGSDSGIQFL SWLTHDRPSG LVHDFTR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.17e-30GATA family protein