PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004064-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 78aa    MW: 8779.77 Da    PI: 8.4516
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004064-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.31.7e-08951344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WTt   +l+ +a +++ ++   +W ++a+ +g  ++++++k ++
   AUR62004064-RA  9 SWTTKQNKLFEKALALYDKDtqdRWQKVANVVG--KSPEEVKRHY 51
                     7*******************************8..9********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
MASCSSNSSW TTKQNKLFEK ALALYDKDTQ DRWQKVANVV GKSPEEVKRH YEILVEDVKS  60
IEQGQVPYPY RSTGNNG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.18e-29MYB_related family protein