PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004127-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 244aa    MW: 27219.4 Da    PI: 6.1589
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004127-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.4e-084321444
                     HHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding 14 davkqlGggtWktIartmgkgRtlkqcksrw 44
                     ++  ++G++ W++Ia ++  gRt++++k++w
   AUR62004127-RA  4 ELQGEFGNK-WAKIATYLA-GRTDNDVKNFW 32
                     566689***.*********.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MVIELQGEFG NKWAKIATYL AGRTDNDVKN FWSSRQKRLA RLLHSQSPTR PNKKHKSSAS  60
SSKDRPHFRE VSKNSSMEGE SSSKAQSLNS SSNSSTGKKT MELIPFPGSV NHSCPCFEAK  120
SATYLDPIPL NTYCNHTDLQ LLEMPSFPSI PLPPFQTDFP FLPETQELID RLDYSFFAPF  180
GYINEPALIN DGVHFFSCFG GGGVSGETRV KREDNHVAPD SFFDDFASDV FDEIEPLPSP  240
PRW*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.12e-21MYB family protein