PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004175-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family YABBY
Protein Properties Length: 137aa    MW: 15305.3 Da    PI: 9.0486
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004175-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY113.24.5e-354411093160
           YABBY  93 stsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknW 160
                     ++ + + +  +++++e+p++ppv+rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaakn 
  AUR62004175-RA  44 MSVRGVDH-LHHHHQEIPKPPPVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNE 110
                     22223333.5678899**************************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MFNAIAVSVP SSSLFKTVTE EIRSSTPNIL INNHHQPMFN DPMMSVRGVD HLHHHHQEIP  60
KPPPVNRPPE KRQRVPSAYN RFIKDEIQRI KAGNPDISHR EAFSAAAKNE GEHDQVMMKE  120
GFLAPQANVN VGVGPY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.11e-28YABBY family protein