PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004411-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 239aa    MW: 26000.9 Da    PI: 7.0988
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004411-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.42.2e-3162120259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+ver+++dpk++++tY++eHnh+
  AUR62004411-RA  62 SDMWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERNRSDPKMFIVTYTSEHNHP 120
                     79*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
METPPDWDLL AVLRGLIKPS HVIFGTSSPS IAGNNASQTQ RTKKRKNLMK KVCHVPAEGL  60
SSDMWAWRKY GQKPIKGSPY PRGYYRCSSS KGCLARKQVE RNRSDPKMFI VTYTSEHNHP  120
MPTHRNSLAG STRQKPLTTT GTPPEQPTCS SPSAASLSPL TEKSESKTEG DELIKEEEDT  180
SEMALSDLML NDDFYVGFEQ IDGGSDGSDC FSDHFSPSSS EFPWLSNSSS TAAAAGGS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.14e-66WRKY family protein