PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62004517-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB

Protein Properties

Length: 174aa MW: 19849.7 Da PI: 8.7493

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62004517-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.4	1.9e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed ll+++++ +G g+W++ +++ g+ R++k+c++r +yl AUR62004517-RA 14 RGPWTAREDALLIKYIEAHGEGQWRSLPKKAGLLRCGKSCRLRRMNYL 61 89****************************99*******99996 PP
2	Myb_DNA-binding	57.2	3.9e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eEd+l+++++++lG++ W++Ia +++ gRt++++k++w+++l AUR62004517-RA 67 RGNITPEEDDLIIRLHALLGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 112 7999****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 174 aa Download sequence
MGRAPCCSKI GLHRGPWTAR EDALLIKYIE AHGEGQWRSL PKKAGLLRCG KSCRLRRMNY 60 LRPDIKRGNI TPEEDDLIIR LHALLGNRWS LIAGRLPGRT DNEIKNYWNT HLSKKLRSQE 120 HHTNMEANGL DDHLMMAIGS SSCGNHDVSI DIMQPNNEVM ATPDNNQQLE KLYE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	2e-64	MYB family protein