PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004520-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Dof
Protein Properties Length: 197aa    MW: 21934.4 Da    PI: 9.5515
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004520-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.39.6e-4052113263
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                     k+++++cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss
  AUR62004520-RA  52 KDQNINCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTQGGSLRNVPVGGGSRKNKRSSS 113
                     7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MDAAQWPQHQ QVAGFSRAME EIAIPNNNNN PTNNNSRATQ VVGDQRKARP QKDQNINCPR  60
CNSTNTKFCY YNNYSLTQPR YFCKTCRRYW TQGGSLRNVP VGGGSRKNKR SSSSLLSSTS  120
NPSINHPTKL IPDLNPPSSL SHLITASHQN PKFLEGHDLN LAFPMQGFPN LQEFKPNMDV  180
FSPPNDHNMV GSGCEI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.17e-43Dof family protein