PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004564-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 257aa    MW: 28912.5 Da    PI: 7.7391
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004564-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.83.9e-13156207155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a++   A++++k+L+
  AUR62004564-RA 156 QRMTHIAVERNRRRQMNEHLNALRSLMPPS---YVQRGDQASVIGGAIDFVKELE 207
                     79****************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MEVGNWLEEF ISSTTTTAAS MKYEDPYNYY SEGGGASYFP SLEDKFLLRL QHQLVESCVT  60
TNTNHHFHNN HNHGINVGGN DSISNDGMII MDIQHSPGVK SETTEIGEKV EKCDGRSTKK  120
THFLKTRTTA PAPVKEKRKR KRATRPAKNK QEVETQRMTH IAVERNRRRQ MNEHLNALRS  180
LMPPSYVQRG DQASVIGGAI DFVKELEQML QSLQAQKKLR QIEENGDVSI EDDCKLGTAD  240
DVARAVHQIF SLISLS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157168RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01460.12e-36bHLH family protein