PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004612-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 207aa    MW: 22404.9 Da    PI: 8.3439
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004612-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.91.8e-13142187655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el+P+     +k  + a++Le+AveY+k+Lq
  AUR62004612-RA 142 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLEEAVEYVKNLQ 187
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
PHNTHQGGLT QLLTAGTNTS SSAAGPGPIP VSRPNTSYNI SPADPGFFEG GGGGGAQQAG  60
NSVAFQRMNS SPAEFLSANI DGLRENDSEQ HSPNFSSHRR GEQSGQLSTA SSLVEMEMEK  120
LLEDSVPCRV RAKRGCATHP RSIAERVRRT RISDRIRKLQ ELVPNMDKQT NTADMLEEAV  180
EYVKNLQKQI QDLTEQQKKC KCVVKS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09180.12e-53bHLH family protein