PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004723-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 252aa    MW: 27433.3 Da    PI: 6.5122
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004723-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-183282155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  AUR62004723-RA 32 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 82
                    59*****998.**********9...336************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MVKSEVKIQS EASKAMSSLS PKSQPSSSSL KKKYKGVRMR SWGSWVSEIR APNQKTRIWL  60
GSYSTPEAAA RAYDAALLCL KGSSANLNFP HTAYSTTSPL IPATNAAVAT VMSPKSIQRV  120
AAAAAAATNX XXXXXXXXXD EHTTQAHPST SSSHSSMTSS PSQSSSPPPS DQLIDDIISL  180
ADDPYHPTFD DINNAASSMV MMNNDYPWFD LSPKHLDPVM MNSMFFNPPS MNMMDIEQLY  240
DDGDIPLWSF R*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77640.12e-30ERF family protein