PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62004732-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bZIP

Protein Properties

Length: 248aa MW: 28444.7 Da PI: 6.3217

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62004732-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.2	1.3e-06	98	145	6	50
HHHCHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqk...NReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 + rrk + NReA r++R++ ka+ + Lee++++L+ N++L k+le AUR62004732-RA 98 KRRRKDQgcnNREAVRKYREKIKAREAILEEEIQKLKDSNQQLLKRLE 145 4444433344**********************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MPTIDDTNLD FSNLDMFSVT DMGELPHSAS MDNILEELLQ DTHVCTDTNT RDLGEDRDLT 60 HHDDFHLQTN VLHTSSNNEE KSSDNDDFVL INEHKGKKRR RKDQGCNNRE AVRKYREKIK 120 AREAILEEEI QKLKDSNQQL LKRLEGERAL HAEISGLKCL LVDIRGRIEG EISSFRYHKP 180 SNTSFHRGYD HRILCNEHYG IGGKKLQLDS VLYDGGESMK VNYMKSKSVG TKPSKDIFIF 240 GKELDNH*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	102	KKRRRK
2	97	118	KKRRRKDQGCNNREAVRKYREK
3	98	119	KKRRRKDQGCNNREAVRKYREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16770.1	8e-43	bZIP family protein