PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62004804-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 149aa    MW: 17769.2 Da    PI: 7.25
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62004804-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR164.23.7e-2033124290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtkleleHnHela 90 
                     +Yn+YAk+ G+ vrk++s ++  +g+ ++r+f+C + gk+  +  + +k +r++++ r++Cka++++ +++      ++w+vtk+++eHnHel 
  AUR62004804-RA  33 YYNNYAKRHGYVVRKDSSDTK--HGRAVRRDFYCHCGGKKPLKVVDMSKPQRQKESCRCDCKAHMRIVLKRcfdifPEEWHVTKFVKEHNHELL 124
                     8***************99988..8889*******************9999****************998877777779**************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MLHFDLNDPV IEEDENEPFI GQTFEIQEES YLYYNNYAKR HGYVVRKDSS DTKHGRAVRR  60
DFYCHCGGKK PLKVVDMSKP QRQKESCRCD CKAHMRIVLK RCFDIFPEEW HVTKFVKEHN  120
HELLSSDEMH LLAANRFIRQ EDEKKFTL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.13e-27FAR1 family protein