PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62004910-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

CPP

Protein Properties

Length: 652aa MW: 72009.4 Da PI: 5.4805

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62004910-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50	5.9e-16	355	393	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCk+skClk+YCeCfaag +C e C+C+dC+Nk AUR62004910-RA 355 SCKRCNCKRSKCLKLYCECFAAGLYCVEPCNCQDCFNKP 393 689**********************************96 PP
2	TCR	52.6	9.4e-17	439	478	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks ClkkYCeCf+ g+ Cs C+Ce+CkN+ AUR62004910-RA 439 RHKRGCNCKKSGCLKKYCECFQGGVGCSFGCRCEGCKNTF 478 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence
MKYECNSPEN NVVNCGVVKT LSEFNVAGTE LFTAKVEQDN SKEADCSFGN EMGLLANPMT 60 QNKEVCEWEK FVCEASDMSN YHSPTDENYQ DGSDDRNTDS GMLSFVATVL QPPNEHINDP 120 QKLDPDCPFI SENHHMDVPM NKQGEIGNLN ERNQVTAGDA SVLAEEVVHY SRTEIGDKSG 180 SQQQQTTRRR CLVYEMSGSH YRKLLADSTG NSPTKPAASS SILNDKCLMV SRPGGNKFSS 240 TLPGIGLHLN TLTAGAKDKI IVKRQTLTCR RQLISSQCTT SAIGSLNSDT KPVTTQITPT 300 PNVVKREPEE QTEEVQVSGD GDVSENSIYG EGIEFPQDSF KKKRRKAETI AEADSCKRCN 360 CKRSKCLKLY CECFAAGLYC VEPCNCQDCF NKPVHEETVL ETRRQIESRN PLAFAPKVIR 420 CSSTPNNEEE LIKTPASARH KRGCNCKKSG CLKKYCECFQ GGVGCSFGCR CEGCKNTFGR 480 KEGTESFLYQ ETRFLQRNAS DVSSLNDLPI TNEEDHDQET PEPSMNARQP VRQPFHFGGM 540 VPRFSSLSSG PFLQSCTSQN IDNPDQAAFD EDIKIGAPED DASEALTGEY SLPTTCVKSA 600 SPNCKRISSP QCDFETSPAW RGCRKLILRS ISSFPTFTVE KESTQLHGKL Q*

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence

MKYECNSPEN NVVNCGVVKT LSEFNVAGTE LFTAKVEQDN SKEADCSFGN EMGLLANPMT  60
QNKEVCEWEK FVCEASDMSN YHSPTDENYQ DGSDDRNTDS GMLSFVATVL QPPNEHINDP  120
QKLDPDCPFI SENHHMDVPM NKQGEIGNLN ERNQVTAGDA SVLAEEVVHY SRTEIGDKSG  180
SQQQQTTRRR CLVYEMSGSH YRKLLADSTG NSPTKPAASS SILNDKCLMV SRPGGNKFSS  240
TLPGIGLHLN TLTAGAKDKI IVKRQTLTCR RQLISSQCTT SAIGSLNSDT KPVTTQITPT  300
PNVVKREPEE QTEEVQVSGD GDVSENSIYG EGIEFPQDSF KKKRRKAETI AEADSCKRCN  360
CKRSKCLKLY CECFAAGLYC VEPCNCQDCF NKPVHEETVL ETRRQIESRN PLAFAPKVIR  420
CSSTPNNEEE LIKTPASARH KRGCNCKKSG CLKKYCECFQ GGVGCSFGCR CEGCKNTFGR  480
KEGTESFLYQ ETRFLQRNAS DVSSLNDLPI TNEEDHDQET PEPSMNARQP VRQPFHFGGM  540
VPRFSSLSSG PFLQSCTSQN IDNPDQAAFD EDIKIGAPED DASEALTGEY SLPTTCVKSA  600
SPNCKRISSP QCDFETSPAW RGCRKLILRS ISSFPTFTVE KESTQLHGKL Q*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	341	345	KKKRR
2	341	346	KKKRRK
3	342	346	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	5e-73	CPP family protein