PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62005535-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 257aa    MW: 28542.9 Da    PI: 10.0755
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62005535-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.34.2e-0767122149
            FAR1   1 kfYneYAkevGFsvrkskskks.......krngeitkrtfvCskegkreeekkkte 49 
                     +fY +YAke+GF+vr s++k         + +g ++ + f Cskeg+ +++kk+ +
  AUR62005535-RA  67 SFYYKYAKECGFKVRSSTTKVDknkvgssNGKGVTVIKYFLCSKEGYVTNNKKAGK 122
                     5**************998776655667655667788899*********99999822 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MTESVEHCCA AVTDEDKNVK IFKTPTQPVL PKIYYNSRGD KLYILGCSLE NKLILGMKFD  60
SRGDGISFYY KYAKECGFKV RSSTTKVDKN KVGSSNGKGV TVIKYFLCSK EGYVTNNKKA  120
GKQVEGKSIH EIPDLYIMNR WKKDIMKKAS ATNVVLDDAS KYDKKKQLML TKNNLESATS  180
SKEVKDVDIK VLVGSNEVDV NILPPNQCLN KGSARSSKRL KSVKEIASEE KSKKGRICRA  240
CGQSGVSHDS RNFPNK*