PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62005550-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

ARR-B

Protein Properties

Length: 619aa MW: 69433.8 Da PI: 5.3008

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62005550-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	76.5	3.5e-24	189	244	1	55
G2-like 1 kprlrWtpeLHerFveaveqLG.GsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt +LH++Fv+av+qLG s+k Pk+il+lm+v+ Lt+e+v+SHLQkYRl AUR62005550-RA 189 KARVVWTVDLHQKFVKAVKQLGiDSDKIGPKKILDLMNVPWLTRENVASHLQKYRL 244 68*****************7447899*************************8 PP
2	Myb_DNA-binding	41.5	3.2e-13	191	243	1	48
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmg.kgRtlkqcksrwqkyl 48 r WT ++++++v+avkqlG + +k+I m+ +t++++ s++qky+ AUR62005550-RA 191 RVVWTVDLHQKFVKAVKQLGIDsdkiGPKKILDLMNvPWLTRENVASHLQKYR 243 678*************************************************7 PP
3	Response_reg	79.3	1.3e-26	21	129	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+k y ev+++ ++eal+ll++++ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge + + + ++ G AUR62005550-RA 21 VLVVDDDPTWLKILEKMLKKCCY-EVTTCGLAREALKLLRDRKdgFDIVISDVNMPDMDGFRLLEHVGLEM-DLPVIMMSVDGETSRVMKGVQHG 113 89*******************.***********888889******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ ++el + AUR62005550-RA 114 ACDYLLKPIRMKELKN 129 **********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MGMEHGFSTP RTETFPAGLR VLVVDDDPTW LKILEKMLKK CCYEVTTCGL AREALKLLRD 60 RKDGFDIVIS DVNMPDMDGF RLLEHVGLEM DLPVIMMSVD GETSRVMKGV QHGACDYLLK 120 PIRMKELKNI WQHVVRKRMH DVRDIECFED RSGTDHSYDG LYGGDQMFVK KRKDVDIEKD 180 SSDPSTTKKA RVVWTVDLHQ KFVKAVKQLG IDSDKIGPKK ILDLMNVPWL TRENVASHLQ 240 KYRLYLSRLR KEDKMESSFG GMKNPDLSPK ESSGSFISIQ NSNFGQHDIT SKHVYQGNQL 300 PVQTVDSKSP DNDPESSKLL PLPLTEHIIP FSTEDCDSHT RNSQLGLNHT YESLDMSVKH 360 ASFDSPVSGQ YPWSREVPDH LQFEPEFKAH PKLESCTFNQ PTVPILHQHI SPEILEPAPH 420 ISPGPSISKS NNIGLVDIIS LNVKECGNDT GKLSPTESAL GSYPLSNSDV LGCVSDMKSQ 480 NFSQGVSSFK EPALFERPLQ SFPIQSESHL VGARGLDPCF DVTLEMKKQI SCQSSIIDPS 540 SVTGSESELR NQVLGSELAS GLLSEDMFLW LQYGDVTSKD FGLDYIGFTG CNFPDFDTET 600 PLPPYMPKLD HEYLLDWV*

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MGMEHGFSTP RTETFPAGLR VLVVDDDPTW LKILEKMLKK CCYEVTTCGL AREALKLLRD  60
RKDGFDIVIS DVNMPDMDGF RLLEHVGLEM DLPVIMMSVD GETSRVMKGV QHGACDYLLK  120
PIRMKELKNI WQHVVRKRMH DVRDIECFED RSGTDHSYDG LYGGDQMFVK KRKDVDIEKD  180
SSDPSTTKKA RVVWTVDLHQ KFVKAVKQLG IDSDKIGPKK ILDLMNVPWL TRENVASHLQ  240
KYRLYLSRLR KEDKMESSFG GMKNPDLSPK ESSGSFISIQ NSNFGQHDIT SKHVYQGNQL  300
PVQTVDSKSP DNDPESSKLL PLPLTEHIIP FSTEDCDSHT RNSQLGLNHT YESLDMSVKH  360
ASFDSPVSGQ YPWSREVPDH LQFEPEFKAH PKLESCTFNQ PTVPILHQHI SPEILEPAPH  420
ISPGPSISKS NNIGLVDIIS LNVKECGNDT GKLSPTESAL GSYPLSNSDV LGCVSDMKSQ  480
NFSQGVSSFK EPALFERPLQ SFPIQSESHL VGARGLDPCF DVTLEMKKQI SCQSSIIDPS  540
SVTGSESELR NQVLGSELAS GLLSEDMFLW LQYGDVTSKD FGLDYIGFTG CNFPDFDTET  600
PLPPYMPKLD HEYLLDWV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-126	ARR-B family protein