PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62005615-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YC
Protein Properties Length: 124aa    MW: 13854 Da    PI: 9.9495
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62005615-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC44.43.6e-1414941897
           NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97
                    + ++P  r+kki+k+d+d+++i++ea  l+s a elf+  l+ +s   a e+kr+ +k   +  av+r + + dfl+d  p
  AUR62005615-RA 14 KPSFPTGRVKKIVKFDKDITRITSEALFLVSGATELFLHFLAEKSAEIAVEKKRKNIKLDYLRLAVKRHHpTRDFLLDSLP 94
                    5689**************************************************************9976489*****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MAEEEENPSP ETLKPSFPTG RVKKIVKFDK DITRITSEAL FLVSGATELF LHFLAEKSAE  60
IAVEKKRKNI KLDYLRLAVK RHHPTRDFLL DSLPLPSSQP LDDPPADRTV KGKSVLPPNT  120
RHG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.12e-33NF-YC family protein