PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62005656-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TCP

Protein Properties

Length: 208aa MW: 22332.7 Da PI: 4.9289

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62005656-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	82.3	1.2e-25	1	65	24	88
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 ++a+caar+F+L++eLG+++d++ti+WLlqq+++ai+++tgt++ +as++ +++ss+s++ s + AUR62005656-RA 1 MPALCAARIFQLTKELGHKSDGETIQWLLQQSEQAIIAATGTGTMPASFTsTSGSSVSEQR-TSVS 65 9*****************************************9999999954444444444.3332 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MPALCAARIF QLTKELGHKS DGETIQWLLQ QSEQAIIAAT GTGTMPASFT STSGSSVSEQ 60 RTSVSSGIVS GFSGGLSLIN ENLGRTHFQT GSWGYGSGSV HVPDPGFSSS SSSLMRENLD 120 CRPKMGVHQT MGMSNLDMGF MNFGQQQQQG RDSLELGLSQ DNVNLGVLNY GAFNQMYQQF 180 RQSREEAGFS CDQQEKFLDD GGSQCSR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	3e-25	TCP family protein