PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62005746-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 212aa    MW: 23984 Da    PI: 8.4766
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62005746-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.69e-182481056
                    HHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox 10 eqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    eq+++Le+ Fe  +++  e++ +LAk lgL+ rq+ +WFqNrRa++k
  AUR62005746-RA  2 EQVKTLEKNFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWK 48
                    8*********************************************9 PP
2HD-ZIP_I/II118.92.8e-38284991
     HD-ZIP_I/II  9 eqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
                    eqvk+LE++Fe  +kLeperK++la++Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr++dalk++n+ L +++++L++e+
  AUR62005746-RA  2 EQVKTLEKNFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDALKADNDLLLAQNQKLQSEI 84
                    9*******************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MEQVKTLEKN FELGNKLEPE RKMQLAKALG LQPRQIAIWF QNRRARWKTK QLEKDYDLLK  60
RQFDALKADN DLLLAQNQKL QSEILALKNR EPTESINLNK ETEGSSSNRS ENSSDIKLDI  120
SRTPTTTTIE STLDLSAHPT TTAAAATATA SRRTFFPPSS MRPNGPPVAQ VLFQSPQQQP  180
PSVKEETFTS MFCGIDDQTG FWPWIDQQNF N*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14351RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.12e-71HD-ZIP family protein