PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62005806-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 342aa MW: 38251.8 Da PI: 5.0832

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62005806-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	42.3	1.7e-13	21	54	1	32
G2-like 1 kprlrWtpeLHerFveaveqLGGse..kAtPkti 32 kprlrWtp+LH+rFveav+qLGG++ +A+P+ i AUR62005806-RA 21 KPRLRWTPDLHQRFVEAVDQLGGANscVAIPSFI 54 79*********************98334677766 PP
2	Myb_DNA-binding	30.8	6.8e-10	23	78	1	40
TSSS-HHHHHHHHHHHHHTTTT................-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg................tWktIartmgkgRtlkqc 40 r+rWT+++++++v+av qlGg t+k +r++ +g+ ++ AUR62005806-RA 23 RLRWTPDLHQRFVEAVDQLGGAnscvaipsfifsyygaTPKGLMRKFRLGKNHQHI 78 89****************99***99999999999999999999988877776 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGHLQNLETQ DMNLVLSTDA KPRLRWTPDL HQRFVEAVDQ LGGANSCVAI PSFIFSYYGA 60 TPKGLMRKFR LGKNHQHIQQ SETCSESKPD DADCEESQAM DTLNLFCEEK EINDPSQEQI 120 NENVQISEAI KVQMEVQKKL HEQIEVQRHL QLRIEAQGKY LQKVLKKAQE TLSSYNCTAA 180 GVEHAKAELS QLVSMVSTSS FSGLTEVTDL SLEQKHIMRH TVCSAESSLT SSESSEQKET 240 GLENEEITGK GSQEQCLFVL PLLDQLRTKG SGSRKRSRSI VFDSNCVEQT DSKKSFKQGY 300 GEEMGHGLKK FGLFETIDLN SQCENDLDLG PRQAIDLNSK E*

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGHLQNLETQ DMNLVLSTDA KPRLRWTPDL HQRFVEAVDQ LGGANSCVAI PSFIFSYYGA  60
TPKGLMRKFR LGKNHQHIQQ SETCSESKPD DADCEESQAM DTLNLFCEEK EINDPSQEQI  120
NENVQISEAI KVQMEVQKKL HEQIEVQRHL QLRIEAQGKY LQKVLKKAQE TLSSYNCTAA  180
GVEHAKAELS QLVSMVSTSS FSGLTEVTDL SLEQKHIMRH TVCSAESSLT SSESSEQKET  240
GLENEEITGK GSQEQCLFVL PLLDQLRTKG SGSRKRSRSI VFDSNCVEQT DSKKSFKQGY  300
GEEMGHGLKK FGLFETIDLN SQCENDLDLG PRQAIDLNSK E*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69580.1	2e-49	G2-like family protein