PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62005809-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Dof

Protein Properties

Length: 458aa MW: 50132.2 Da PI: 5.6829

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62005809-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.3	8.4e-39	144	203	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+++c+rC s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s AUR62005809-RA 144 PDKIVPCARCSSMDTKFCYYNNYNVNQPRHFCKSCQRYWTAGGSMRNVPVGAGRRKNKNS 203 7899*****************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MSENYEDFSI KLFGKTIQVG SNINDDFVSA SVFEPSSAAV DFEYDCESTC DQNLLCSKQD 60 KIRGNEEKIT KEAMETKREG ELSCTSVLDE PKTPTTPSTD TEKPKTCTID KFCSSQDQPK 120 KDQDQSDQAS SNSESNDQNP LKKPDKIVPC ARCSSMDTKF CYYNNYNVNQ PRHFCKSCQR 180 YWTAGGSMRN VPVGAGRRKN KNSAASHHRH LVIPGASDCL IHQVMRPDGT VLAFGMDSPP 240 NYSKDSQKNS VSFSNPNLVS MKEANCNGGT IESPQPVPCF PYSWNPVSWQ SGFPVSFYST 300 SSPQWGDSIA AGPCNLQWIP TQSLNSDQSS TNSSPNNSSS LGKHSREGRT LEPLNTDNNE 360 SSNDKELENL MPKTLKINDP IEASKSSIWT ILGVKNNNHN ASSSIGRVAF FGGLQQAKDV 420 NNYEINNNAA GVEASSLALQ ANPAAFSRSL AFHEIAQ*

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MSENYEDFSI KLFGKTIQVG SNINDDFVSA SVFEPSSAAV DFEYDCESTC DQNLLCSKQD  60
KIRGNEEKIT KEAMETKREG ELSCTSVLDE PKTPTTPSTD TEKPKTCTID KFCSSQDQPK  120
KDQDQSDQAS SNSESNDQNP LKKPDKIVPC ARCSSMDTKF CYYNNYNVNQ PRHFCKSCQR  180
YWTAGGSMRN VPVGAGRRKN KNSAASHHRH LVIPGASDCL IHQVMRPDGT VLAFGMDSPP  240
NYSKDSQKNS VSFSNPNLVS MKEANCNGGT IESPQPVPCF PYSWNPVSWQ SGFPVSFYST  300
SSPQWGDSIA AGPCNLQWIP TQSLNSDQSS TNSSPNNSSS LGKHSREGRT LEPLNTDNNE  360
SSNDKELENL MPKTLKINDP IEASKSSIWT ILGVKNNNHN ASSSIGRVAF FGGLQQAKDV  420
NNYEINNNAA GVEASSLALQ ANPAAFSRSL AFHEIAQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	3e-63	Dof family protein