PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62006027-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HD-ZIP

Protein Properties

Length: 202aa MW: 23173.9 Da PI: 5.0608

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62006027-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	38	2.8e-12	22	52	26	56
-HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 26 saeereeLAkklgLterqVkvWFqNrRakek 56 +++ + A++lgL+ rqV +WFqN+Ra++k AUR62006027-RA 22 EPRKKVQVARELGLQPRQVAIWFQNKRARWK 52 5677889***********************9 PP
2	HD-ZIP_I/II	90.7	1.7e-29	17	87	20	90
HD-ZIP_I/II 20 eeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 ++ +Lep++Kv++areLglqprqva+WFqn+RAR+k+kq+Ek+y++Lk++yd+lk + e ++ke e+L e+ AUR62006027-RA 17 ADIELEPRKKVQVARELGLQPRQVAIWFQNKRARWKSKQIEKNYRVLKSNYDNLKVRLEGIKKERESLLEQ 87 4558************************************************************9998654 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MMMQGREPSP EATEAEADIE LEPRKKVQVA RELGLQPRQV AIWFQNKRAR WKSKQIEKNY 60 RVLKSNYDNL KVRLEGIKKE RESLLEQELR SLLERSHHRK NGCKDFEAND QDMSKENGEI 120 VAGITARSSS LQEEMDNQGA IYSDDDKSGN IAYLGQEEPE LLKVSEHIDG SLISPMKWCS 180 FDAGSLFDPT STTSHWWDTW T*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.2	2e-28	HD-ZIP family protein