PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62006120-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 158aa    MW: 18588.2 Da    PI: 5.7543
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62006120-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.11.2e-1637128398
                     EE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   3 kvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     k  + +++ +++ l++p k+++++ + ++  +   +l   +g++W+v+l   k +g+++l+kGW+ Fvk   Lk g f++F++d+  + e++v++
  AUR62006120-RA  37 KLIVAPSTQSHN-LRIPEKYVRTYyE-EQLANDYAKLSVNDGKVWRVEL--FKEGGKVWLSKGWECFVKNYSLKYGYFLLFRYDE-VKYEYHVTI 126
                     555555666555.***********63.44555689999999********..9999***************************987.88889***9 PP

                     E- CS
              B3  97 fr 98 
                     f+
  AUR62006120-RA 127 FD 128
                     98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MQVLEKGNKI KGKKIALTTI PETTPDNLQA LGPCFYKLIV APSTQSHNLR IPEKYVRTYY  60
EEQLANDYAK LSVNDGKVWR VELFKEGGKV WLSKGWECFV KNYSLKYGYF LLFRYDEVKY  120
EYHVTIFDMT CFEIEYDQEF DNHTKDQEVI KISPQEE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-21B3 family protein