PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62006319-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 392aa MW: 43443.6 Da PI: 7.3084

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62006319-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.7	1.3e-33	35	89	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl AUR62006319-RA 35 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 89 79****************************************************8 PP
2	Myb_DNA-binding	72.4	7.1e-23	37	88	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ AUR62006319-RA 37 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 88 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MFHHPKKPSS MNSNERTSSM CVQNDSGLVL TTDPKPRLRW TVELHERFVD AVTQLGGPDK 60 ATPKTIMRVM GVKGLTLYHL KSHLQKFRLG KQPHKDFTDH HSVKQDATSL ELQRNTASSS 120 GLMGRNMNDS NVHISDAIRM QLEVQRRLQE QLEVQRHLQL RIEAQGKYMQ NILEKACQTL 180 AGETNMAASA SYNNKGNNNI LGNNSPTMAG DHLEGPMKEF GPMNFPSLQD LNIYGGEQAL 240 DLHSSLDRSS SLENFMQVPS DSLCLGNKKR PNPYNNGNNN NNGKSPLIWS DDHLRLQELG 300 PPTVANCLGN SQDHEDPFKG TDIQIAPPSL DHHRSGAEHQ IDSISEIYES KPLLTSDIVV 360 GGDKKFESSP KLERLSPASQ GTPLGRNSPY S*

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MFHHPKKPSS MNSNERTSSM CVQNDSGLVL TTDPKPRLRW TVELHERFVD AVTQLGGPDK  60
ATPKTIMRVM GVKGLTLYHL KSHLQKFRLG KQPHKDFTDH HSVKQDATSL ELQRNTASSS  120
GLMGRNMNDS NVHISDAIRM QLEVQRRLQE QLEVQRHLQL RIEAQGKYMQ NILEKACQTL  180
AGETNMAASA SYNNKGNNNI LGNNSPTMAG DHLEGPMKEF GPMNFPSLQD LNIYGGEQAL  240
DLHSSLDRSS SLENFMQVPS DSLCLGNKKR PNPYNNGNNN NNGKSPLIWS DDHLRLQELG  300
PPTVANCLGN SQDHEDPFKG TDIQIAPPSL DHHRSGAEHQ IDSISEIYES KPLLTSDIVV  360
GGDKKFESSP KLERLSPASQ GTPLGRNSPY S*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	1e-79	G2-like family protein