PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62006508-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family LBD
Protein Properties Length: 122aa    MW: 13258.8 Da    PI: 4.3168
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62006508-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260575.8e-1825548101
          DUF260  48 alpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101
                     +lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q++ l+a+la++++e+
  AUR62006508-RA   2 DLPESQRADAVSSMVYEANARLRDPVYGCAGAICQLQKQVNDLQAQLAKAQAEI 55 
                     57999********************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MDLPESQRAD AVSSMVYEAN ARLRDPVYGC AGAICQLQKQ VNDLQAQLAK AQAEILNMKC  60
QQTNLLALLC MEMAHDHDES PPSNTSSQSV SPEHPNRGVS NNACFIDDNN LGGSLWEPLW  120
T*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.19e-33LBD family protein