PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62006559-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 197aa    MW: 22574.8 Da    PI: 4.5721
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62006559-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.47.4e-08129157334
             AP2   3 ykGVrwdkkrgrWvAeIrdpseng.krkrfslg 34 
                     y GVr+++ +gr++AeIrdp   + k  r++lg
  AUR62006559-RA 129 YIGVRRRP-WGRFAAEIRDP---NrKGYRIWLG 157
                     88******.**********9...5456999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MDPLAQDTIS ALQQIEQQLF DDEVDDQYTS SSPSSSLTNL NSSSSSFTTQ LNPPNNNSRS  60
SSFTISFSNN EGRCRTTHSD NDPLLEYIQS SLEEGIDYEE TFHVFCCKPR KVVATKDNAT  120
NNHKLRGNYI GVRRRPWGRF AAEIRDPNRK GYRIWLGEKR QRDEVSEKII GDDDDFYSFI  180
DELIDEELII KMPRTF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.18e-13ERF family protein