PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62006795-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C3H
Protein Properties Length: 142aa    MW: 15848.9 Da    PI: 9.222
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62006795-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH37.44.3e-125981527
                    --SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH  5 lCrffartGtCkyGdrCkFaHgp 27
                     C++f+rtG+C+yGd+Ck++H++
  AUR62006795-RA 59 VCNRFLRTGFCPYGDSCKYHHPK 81
                    6********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MTVGKYYCDY CDKEFKDTAS ARRRHLQGIA HHRNRKLWYD SLSLPQDPNF TQQSFGNGVC  60
NRFLRTGFCP YGDSCKYHHP KHNLQGPITQ GQGTPSKFLL PQLSPGHVAS QSFGMSLGNL  120
PPSLRPPPEG GYPPLPFVDW G*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26749.12e-28C3H family protein