PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62007012-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Nin-like

Protein Properties

Length: 953aa MW: 104746 Da PI: 6.0928

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62007012-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93.1	2e-29	564	615	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ AUR62007012-RA 564 AEKQISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 615 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 953 aa Download sequence
MDLDFGDLDA SWSFDQIPTS PVLISTSDQP FSPLWAFTDG STAAAVNSSD DRNLPGIRIP 60 AELARFTPCN TEPVGENGGN EGGEEEDYKK KIPSPGLGHT PLDSFDVSFI IKERMTQALR 120 HFKESTEQNQ ILAQIWAPVK SGNQYVLTTS GQPFVLRPHS NGLNQYRTVS LMYMFSIDGE 180 SITTLGLPGR VFRQKLPEWS PNVQYYTSKE YPRVKHAKHY NVRGTLALPV LEPSGQSCVG 240 VLELIMTSQK INYAPEVDKV CKALEAVNLK SSEILDHPNI QICNEGRQNA LAEILEVLTE 300 VCETYKLPLA QTWVPCRHRS VLAYGGGVKK SCSSFDGSCM GQVCMSTTDV AFYVVDAHMW 360 GFREACAEHH LQKGQGVAGR SFSSHGLSFC RDISQFCKIE YPLVHYARMF GLTGSFAICL 420 RSKHTGDDDY ILEFFLPLSL KDTTEQLKLL GSILATMKQD LQNLMVASGR TLEEERNYME 480 IIEVSADENQ DLQVESNLST NPQSGAETIN GVPQPLNISQ PQLVELDSRN AGKSVVGAGQ 540 CHNGISVVEN KEIKKTSERK RGKAEKQISL EVLQQYFAGS LKDAAKSLGV CPTTMKRICR 600 QHGISRWPSR KINKVNRSLT KLKRVIESVQ GTDGTFSLTS LGQPTIPVPV GSISWPAGVN 660 GTYQQQSPTS KSYDLPDERS EMPQLSQRVD RQTSGRESSH EERTHEQNEL VSKAGSGSRE 720 VSAGTSTSHG SCHGSPGIES NPPNGHFVPN FHDQIGNSTG LMGQLNGESH LVSGYSMPDA 780 LLAAHHPREA FGGMPLEDAG SSKDLRNLCP SANDTNVEEV IPEHGWTNHH CPIPSPRVSM 840 SAAGMMPRFL ARQDMNAVTI KATFREDIIR FRFSLNSNIV ELKEEVAKRF KLEVGTFEIK 900 YLDDDHEWVF IACDSDLQEC LDISKSSGSN MVRLLIQDVS GNPGSSCESS GG*

Sequence ? help Back to Top

Protein Sequence Length: 953 aa Download sequence

MDLDFGDLDA SWSFDQIPTS PVLISTSDQP FSPLWAFTDG STAAAVNSSD DRNLPGIRIP  60
AELARFTPCN TEPVGENGGN EGGEEEDYKK KIPSPGLGHT PLDSFDVSFI IKERMTQALR  120
HFKESTEQNQ ILAQIWAPVK SGNQYVLTTS GQPFVLRPHS NGLNQYRTVS LMYMFSIDGE  180
SITTLGLPGR VFRQKLPEWS PNVQYYTSKE YPRVKHAKHY NVRGTLALPV LEPSGQSCVG  240
VLELIMTSQK INYAPEVDKV CKALEAVNLK SSEILDHPNI QICNEGRQNA LAEILEVLTE  300
VCETYKLPLA QTWVPCRHRS VLAYGGGVKK SCSSFDGSCM GQVCMSTTDV AFYVVDAHMW  360
GFREACAEHH LQKGQGVAGR SFSSHGLSFC RDISQFCKIE YPLVHYARMF GLTGSFAICL  420
RSKHTGDDDY ILEFFLPLSL KDTTEQLKLL GSILATMKQD LQNLMVASGR TLEEERNYME  480
IIEVSADENQ DLQVESNLST NPQSGAETIN GVPQPLNISQ PQLVELDSRN AGKSVVGAGQ  540
CHNGISVVEN KEIKKTSERK RGKAEKQISL EVLQQYFAGS LKDAAKSLGV CPTTMKRICR  600
QHGISRWPSR KINKVNRSLT KLKRVIESVQ GTDGTFSLTS LGQPTIPVPV GSISWPAGVN  660
GTYQQQSPTS KSYDLPDERS EMPQLSQRVD RQTSGRESSH EERTHEQNEL VSKAGSGSRE  720
VSAGTSTSHG SCHGSPGIES NPPNGHFVPN FHDQIGNSTG LMGQLNGESH LVSGYSMPDA  780
LLAAHHPREA FGGMPLEDAG SSKDLRNLCP SANDTNVEEV IPEHGWTNHH CPIPSPRVSM  840
SAAGMMPRFL ARQDMNAVTI KATFREDIIR FRFSLNSNIV ELKEEVAKRF KLEVGTFEIK  900
YLDDDHEWVF IACDSDLQEC LDISKSSGSN MVRLLIQDVS GNPGSSCESS GG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein