PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62007015-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Nin-like

Protein Properties

Length: 719aa MW: 80479.4 Da PI: 6.0259

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62007015-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	56.1	7.4e-18	538	583	1	46
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 aek+is+ed+ Fsl++ dAAk+Lgv+ ++LKr+CRq+ I+RWP+ AUR62007015-RA 538 AEKKISMEDIVPLFSLKLVDAAKQLGVSRSTLKRKCRQFKINRWPS 583 589******************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 719 aa Download sequence
MLLGSCFVLP SAGCCIIYDL KSLSLGENIE DYHDEMMLST PFMGYTPFDN LDVHVSSIIK 60 EKMTQALRCF KESTEQNQIL VQIWAPIKSG NQYVLTTTEQ PFVLGRHSNG LNQYRSVSLM 120 YMFSIDDESV ATHGLPARVF RQKMSEWSPN FQYYTSKEYP QVSHAKHYNI RGTLALPIFE 180 PSGKSCVGVL ELVMTSQKIN YAPEVDKICK ALEAVNLKSS QIPDHQNIQV CNVGRQNALA 240 EILEVLTELC ETYKLPLAQT WVPCRHRCVL AYGGGPKQSC SSFDGSCIEQ VSLSTSDVAF 300 YVVDAHMWGF REACAEHHLQ KGQGVAGGSF SSHGLSYCRD ISQFCKIEYP LVHYARMFGL 360 TGSFAICLRS KHTGDDDYIL EFFLPLSLKD TEQLNLLGSI LATMRQNLQN LMVASGRTLE 420 EERSHKETIE VSVNENLDLQ VESNLSTRSL SNNNINKDNR SVAKLKHVDE YVQVNDGTIM 480 TTHSSDDEII LVDMEPLDRQ LTSETGSSDD EIFLVGENNL SSLQIGQSKM TTDVNAKAEK 540 KISMEDIVPL FSLKLVDAAK QLGVSRSTLK RKCRQFKINR WPSSTKKNVK KFRSKPGSAS 600 IGSAQMNSST PANPLGDEQN LEFLQDSNHG PSSARLDGTC IIFTVKAKYK EDLIKFSFSS 660 TFCFTQLKEE VSKRLNLDSS SFKIKYHDDD DDLVLITCDS DLQYFLCNLE LSKSKAID*

Sequence ? help Back to Top

Protein Sequence Length: 719 aa Download sequence

MLLGSCFVLP SAGCCIIYDL KSLSLGENIE DYHDEMMLST PFMGYTPFDN LDVHVSSIIK  60
EKMTQALRCF KESTEQNQIL VQIWAPIKSG NQYVLTTTEQ PFVLGRHSNG LNQYRSVSLM  120
YMFSIDDESV ATHGLPARVF RQKMSEWSPN FQYYTSKEYP QVSHAKHYNI RGTLALPIFE  180
PSGKSCVGVL ELVMTSQKIN YAPEVDKICK ALEAVNLKSS QIPDHQNIQV CNVGRQNALA  240
EILEVLTELC ETYKLPLAQT WVPCRHRCVL AYGGGPKQSC SSFDGSCIEQ VSLSTSDVAF  300
YVVDAHMWGF REACAEHHLQ KGQGVAGGSF SSHGLSYCRD ISQFCKIEYP LVHYARMFGL  360
TGSFAICLRS KHTGDDDYIL EFFLPLSLKD TEQLNLLGSI LATMRQNLQN LMVASGRTLE  420
EERSHKETIE VSVNENLDLQ VESNLSTRSL SNNNINKDNR SVAKLKHVDE YVQVNDGTIM  480
TTHSSDDEII LVDMEPLDRQ LTSETGSSDD EIFLVGENNL SSLQIGQSKM TTDVNAKAEK  540
KISMEDIVPL FSLKLVDAAK QLGVSRSTLK RKCRQFKINR WPSSTKKNVK KFRSKPGSAS  600
IGSAQMNSST PANPLGDEQN LEFLQDSNHG PSSARLDGTC IIFTVKAKYK EDLIKFSFSS  660
TFCFTQLKEE VSKRLNLDSS SFKIKYHDDD DDLVLITCDS DLQYFLCNLE LSKSKAID*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	0.0	Nin-like family protein