PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007058-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 191aa    MW: 21886.2 Da    PI: 5.369
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007058-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.32.7e-182471156
                    HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox 11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    q++ Le++F +++ p  ++++++A++lgL  rqV++WFqNrRa+ k
  AUR62007058-RA  2 QIKSLESMFSSESRPGSKTKQRIADQLGLHPRQVSIWFQNRRARSK 47
                    99******************************************99 PP
2HD-ZIP_I/II102.63.3e-332851093
     HD-ZIP_I/II 10 qvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
                    q+k+LE++F++e++  ++ K+++a +Lgl+prqv +WFqnrRAR k+kq+E+dy+ Lk++yd+l+++ e+L+ke+++L+ e+++
  AUR62007058-RA  2 QIKSLESMFSSESRPGSKTKQRIADQLGLHPRQVSIWFQNRRARSKSKQTERDYSILKACYDNLASKFEALKKENQSLTVEIQR 85
                    99*****************************************************************************99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MQIKSLESMF SSESRPGSKT KQRIADQLGL HPRQVSIWFQ NRRARSKSKQ TERDYSILKA  60
CYDNLASKFE ALKKENQSLT VEIQRLRNLN EGPKDCTSDS APVTCSSNGE SISLSSQEKH  120
KAQPEDYIQD NILSKNRSEG FMSFEQETDS QFNMIESADD SLASFRNHDG LEPAYLMEHN  180
CISDWWEFWT *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14250RRARSKSKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61890.13e-40HD-ZIP family protein