PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007085-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 242aa    MW: 26847.6 Da    PI: 6.3621
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007085-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B399.22.5e-3142130185
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                     f+kv tpsdv+k++rlv+pk++ae++    ++++e++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ 
  AUR62007085-RA  42 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSNNEKGLLLNFEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 130
                     89****************************77788999************************************************953 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MSSSSSTNNN LSGAATTTTK IEVVDEEEGN KSVVVIEREH MFDKVVTPSD VGKLNRLVIP  60
KQHAEKYFPL DSSNNEKGLL LNFEDRTGKP WRFRYSYWNS SQSYVMTKGW SRFVKEKKLD  120
AGDIVSFQRG VGEIGGSVMQ VQREEGGVEP MVYESVPVVQ GKAAAKRLRL FGVNMDCPIS  180
HQTHDFDILG CSFLLLFVAA RVLAAAFGMS AGAETTNFLY QFTVSDPIIR LHDVFLMSCI  240
E*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.11e-62B3 family protein