PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007117-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 114aa    MW: 12772.6 Da    PI: 9.9414
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007117-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding414.4e-133673645
                     HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      eE+ + v++ ++lG++ W+tIa+++  gRt++++k++w 
   AUR62007117-RA 36 SEEERIVVELQARLGNK-WATIASHLT-GRTDNDVKNFWS 73
                     59***************.********9.***********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
MDLETGAPFN PRAFFHELAN LVVFVGSTNS DPILKSEEER IVVELQARLG NKWATIASHL  60
TGRTDNDVKN FWSSRKKRLA RTLNSSLQPN KCLCLDQNKQ KSAAPPPQLP SKLE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
175101RKKRLARTLNSSLQPNKCLCLDQNKQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.11e-20MYB family protein