PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007169-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Trihelix
Protein Properties Length: 331aa    MW: 35974 Da    PI: 10.1402
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007169-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix58.91.3e-1832106171
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr 71 
                     +Wt++e+laLi a+++++ +lrr++l+ ++We+v++ +     ++   +s+ qC++k+e+l+kry+++k++ +  
  AUR62007169-RA  32 CWTQDETLALIHAYQDKWYSLRRRNLRTADWEAVADEVnrrcPDQSPPKSSAQCRHKMEKLRKRYRAEKQRIGAL 106
                     8***********************************997666677789999******************987764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MPSPPSASVA DPSPPPGNLP PPPVVRKFPA PCWTQDETLA LIHAYQDKWY SLRRRNLRTA  60
DWEAVADEVN RRCPDQSPPK SSAQCRHKME KLRKRYRAEK QRIGALPSHN NFVGNRFFPS  120
SSWVFFDLMD AMEVGSGSGP GSTSVVNNNG VNNGGNNHNM NMNVLNPVNQ NNGGFVKEEK  180
LRGKDDLGKY FDEILMGMGK SGSGSGGPIK FRVKNHGNSS SINNNERYFD EGYDYDGGNN  240
GSGFDYKNGR SNFASGFSKR KLGEDSSSSK MFLNGCSSSK KGFGLGAGSR ARGGRDAAAG  300
EMGDVKKEGR TLTSSQKPYK VRPTETSAIL *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.14e-32Trihelix family protein