PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007281-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 153aa    MW: 17282.3 Da    PI: 8.9985
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007281-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.26.1e-051032123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  AUR62007281-RA 10 YTCTFCRREFRSAQALGGHMNVH 32
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MDTNWPPRSY TCTFCRREFR SAQALGGHMN VHRRDRARLH HQSTVQSQAQ AGSTVNNSIN  60
SPTSLFYQAA NCRSTNNFEV MLPSTSRCTN YIGMQVNDIS QGVIKVNNHE ERAPIEELDL  120
ELRLGHIPLP RPSASHEKLF EKNSNVSVLN FR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.15e-25C2H2 family protein