PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007312-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 90aa    MW: 10229.8 Da    PI: 8.6557
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007312-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding62.39.8e-201562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEdellv +++++G g+W++ ++  g++R++k+c++rw +yl
   AUR62007312-RA 15 KGPWTPEEDELLVSYIQKHGLGSWRALPKAAGLNRCGKSCRLRWTNYL 62
                     79********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MGRSPCCDDI SELKKGPWTP EEDELLVSYI QKHGLGSWRA LPKAAGLNRC GKSCRLRWTN  60
YLRPDIKRGR FTEEEEDMII KLHSVLGNK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.22e-50MYB family protein