PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007377-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family BBR-BPC
Protein Properties Length: 230aa    MW: 25115.4 Da    PI: 10.4003
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007377-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind241.94.5e-7446229120301
       GAGA_bind 120 edsavelreeeklealpieeaaeeakekk..kkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPv 212
                     +++++++     +  +pi+eaa+ + + +   +k ++++k+ k++  +++ k+++ + kk k++s ++ +k+e+k+++   n+ + D s+lP+Pv
  AUR62007377-RA  46 QHNPEGAMSAMPIRCMPINEAANIVVDDEpqPSKPTKKPKTSKKTSDDAAPKEPKPKIKKAKAKSGSSAAKRERKNLNSRSNESTTDASGLPAPV 140
                     4555555556666777777777655433300333334444444444443333333333444444444789************************* PP

       GAGA_bind 213 CsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     C CtGa rqCY+WG+GGWqS+CCtt+iS yPLP+s++r+g+R agrKmS+ga+ kl ++LaaeGydl  p+DLkdhWAkHGtnkfvti+
  AUR62007377-RA 141 CFCTGAARQCYRWGSGGWQSSCCTTNISEYPLPMSATRPGSRTAGRKMSHGAYDKLFQRLAAEGYDLTLPIDLKDHWAKHGTNKFVTIK 229
                     ****************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MGTFRSNYPI IPEGNRSRSV PHFSWFHPGN YLAATRNGFN PFQGTQHNPE GAMSAMPIRC  60
MPINEAANIV VDDEPQPSKP TKKPKTSKKT SDDAAPKEPK PKIKKAKAKS GSSAAKRERK  120
NLNSRSNEST TDASGLPAPV CFCTGAARQC YRWGSGGWQS SCCTTNISEY PLPMSATRPG  180
SRTAGRKMSH GAYDKLFQRL AAEGYDLTLP IDLKDHWAKH GTNKFVTIK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35550.32e-56BBR-BPC family protein