PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007503-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 809aa    MW: 88654 Da    PI: 6.4732
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007503-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2969.8e-914488072374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +++L+++A+ + +g+++laq++Larl+++ s  ++p+ R+a y++eAL+  l++   + ++a ++++ ++++++++++a+klfsevsPi +f ++
  AUR62007503-RA 448 KDQLFKAADLILTGNFSLAQEILARLNHQLSLPAKPLVRAALYVKEALQMLLTG---NPVAAPSSKTLTPYDVVHKMNAYKLFSEVSPITQFMNF 539
                     689**************************************************9...555567888888999*********************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak..rledl 189
                     t+ qaIlea++ ++++HiiDfdi+ G+QW++++q+L  R++gppsl+iT++++ +s++  el  ++e+L +fA+ +g+ fe +v+  +  +l++ 
  AUR62007503-RA 540 TCTQAILEALDDADAIHIIDFDIGCGAQWASFIQELPLRKRGPPSLKITALAP-SSSHPFELALIRENLVQFANDIGIAFELQVVNLDlfDLSSC 633
                     ****************************************************9.667999************************86665567777 PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     +l ++r++++Ea+aV++ +   +        +s  + +L+++k+ sPk+vv  ++  d+ + +F ++++++l+ ++ +++sl+     +++  +k
  AUR62007503-RA 634 SLPNFRTSEDEAIAVSIPIWSSSN------RPSILPPILQFIKQRSPKIVVSLDRGFDRCDVPFPQHLVHTLDSCTNFLESLDGL-NVATDIVNK 721
                     888899999********9943333......3444567*********************************************665.45778999* PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     vE+++++++i+n v  +        e++ +W++ + +aGF+pv++s+++++qa++++++++++g++ve++++slvl W++r+Lv++SaWr
  AUR62007503-RA 722 VEKFFIQPRIENTVLGRVHF----PEKMPHWKNLFASAGFSPVQFSNFTETQADYVVKRTPGRGFHVEKRQASLVLSWQRRELVAASAWR 807
                     **************987665....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 809 aa     Download sequence    
MAGIIRSSLS FIVGTVFGVY VAQNYNVPNM RKLADTVLCK FKPCFAVSWE LMSHSTLYCV  60
LERVDTVTLI DNVLCVAGLP ESVYLLMSWM RAMPYNLQGK GVVENPNPAK KQISASSIES  120
EPTSTLDTTR RSPSPPTSTS TLSSSFTNNC KNNNSTTAGV ADPACARKED WPSHHHQQQG  180
SDNDNVTAAS SVGLGVAALE DWDALFPTGE GALLPWIIGD AEDPSLGLKH LLQSGTLVDY  240
EGNAGLGVVD QGPGFDTPPP PPSRHHLLQQ HPHPLPAPAS EGVTFLGGSE SFANGNAKIG  300
LISPNSSSGY LDTKNGGINP SNAMLLGSXX XXXXXXPHQF EVGDEKPQIF NPQLVMNQHQ  360
AQSLGNPSFF MPPLGYCHLD QHLFQPPNKR HNPGVVLDPN LAVKNPFHDQ GHDLMLRKQQ  420
QAGVGFQQFP MGLPPPMMQQ QLQEQAIKDQ LFKAADLILT GNFSLAQEIL ARLNHQLSLP  480
AKPLVRAALY VKEALQMLLT GNPVAAPSSK TLTPYDVVHK MNAYKLFSEV SPITQFMNFT  540
CTQAILEALD DADAIHIIDF DIGCGAQWAS FIQELPLRKR GPPSLKITAL APSSSHPFEL  600
ALIRENLVQF ANDIGIAFEL QVVNLDLFDL SSCSLPNFRT SEDEAIAVSI PIWSSSNRPS  660
ILPPILQFIK QRSPKIVVSL DRGFDRCDVP FPQHLVHTLD SCTNFLESLD GLNVATDIVN  720
KVEKFFIQPR IENTVLGRVH FPEKMPHWKN LFASAGFSPV QFSNFTETQA DYVVKRTPGR  780
GFHVEKRQAS LVLSWQRREL VAASAWRC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.15e-94GRAS family protein