PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007572-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 190aa    MW: 20932.3 Da    PI: 8.8947
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007572-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA64.11.5e-2071105135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  AUR62007572-RA  71 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 105
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MTVYVFNTEE DCIPRDRRRQ IPGRLFPVSS FCWDLLHPKQ SSSSTPKASR SSNNHAAAAS  60
GGGDPLFVRR CANCDTTSTP LWRNGPRGPK SLCNACGIRF KKEERRAAAA TTTAAAANNG  120
PTAGMMDPHY YNGSWAHQYS QGTPQKMQCY GAPNEFRFIE DDRGSDSGIQ FLSWLTHDRP  180
SGLVHDFTR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.17e-31GATA family protein