PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62007664-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

SRS

Protein Properties

Length: 247aa MW: 26717.5 Da PI: 5.5433

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62007664-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	70.2	6.6e-22	80	118	3	41
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvks 41 + ++sCqdCGnqakkdC+++RCRtCCksrgfdCathvk AUR62007664-RA 80 AANISCQDCGNQAKKDCVYMRCRTCCKSRGFDCATHVKT 118 56799********************************95 PP
2	DUF702	88.9	1.1e-27	119	174	99	154
DUF702 99 eletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +e+ ++P+ev+s+avfrcvrvssvd+ ++e+aYqtav+igGhvfkGiLyd+G+++ AUR62007664-RA 119 GMEVGNFPTEVNSSAVFRCVRVSSVDETDDEYAYQTAVNIGGHVFKGILYDHGVDH 174 578899************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MAEYFSLGTG GNNNKNINYR NEQIPNNNNN YQQHENKLST EELWQHLPCS ELRIAPTEDG 60 GDETTRSGLM MMRMSSTSGA ANISCQDCGN QAKKDCVYMR CRTCCKSRGF DCATHVKTGM 120 EVGNFPTEVN SSAVFRCVRV SSVDETDDEY AYQTAVNIGG HVFKGILYDH GVDHSHQVNT 180 PSPNYGAAET SSGANLAASM GVPASISAMP TSSSSPPVGY LDPSYYPLPL NTYLGPGTPF 240 FPNPRP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G21400.1	2e-38	SRS family protein