PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007787-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 381aa    MW: 42386.4 Da    PI: 7.9816
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007787-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA45.97.6e-1588122133
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkk 33 
                     C++Cg ++  Tp +Rrgp g++tLCnaCGl+++ k
  AUR62007787-RA  88 CQHCGISEndTPAMRRGPAGPRTLCNACGLMWANK 122
                     ******999***********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MKQYVCLSQL VHTYKDVSAC SVGSMIQEFE LQQMFSTCAQ VQPVRTRMHR KNGQFASLRE  60
GSASFNLEAK KNIVVGRSLG LETVSNKCQH CGISENDTPA MRRGPAGPRT LCNACGLMWA  120
NKKPHSKSEV DGKSKGTKGE KKLFRGKDEE LSVLGRLAAG ACAGMTSALS ACNMRSTGIE  180
DTAELLKKHL ISELSEMDLE EALMLGRAFS HYLNLMGIAE THHRYGIQVF GVLSFGHLCK  240
AIPEFQQEIF GANETFAVLH TVVLPKKNYT KLTQLYDKYK DLGLEILAFP SNQFKQEPGT  300
NEEIVEFACT NFKAEYPIFD KNGNKVKLRR KFREFNPDWP GDWCGGGFES RSPPDNGNEC  360
SIDEPRPLSE DFVSLNFVIK *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.24e-18GATA family protein