PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007888-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MIKC_MADS
Protein Properties Length: 233aa    MW: 26701 Da    PI: 7.8519
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007888-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.99.6e-32959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  AUR62007888-RA  9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
                    79***********************************************96 PP
2K-box81.81.6e-2782160987
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekel 87 
                     + ++++e+++qe+ kLk++++ Lqr+qR+llGedL +Ls keL+qLe+qL+ksl++iRs K+e+lle+ + l+ k +e 
  AUR62007888-RA  82 QPSKENENSYQEYLKLKAKVDVLQRNQRNLLGEDLAELSTKELEQLEHQLDKSLRQIRSIKEEMLLESNRALKAKLEES 160
                     567889*****************************************************************99997664 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS  60
SSMAKTLERY QRCSYGSLET GQPSKENENS YQEYLKLKAK VDVLQRNQRN LLGEDLAELS  120
TKELEQLEHQ LDKSLRQIRS IKEEMLLESN RALKAKLEES CATLRQQWDV EAAQNNPTPY  180
VRQSNEDFFE PLPCNNNLPP NGYNVVTQDH LNNATTSTHN DNNNGFTPAW LL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02310.11e-84MIKC_MADS family protein