PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62007937-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 173aa    MW: 18508.6 Da    PI: 10.0144
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62007937-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.62.2e-05121143123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kCp+C+++F++   L  H r+H
  AUR62007937-RA 121 HKCPYCPRVFKSGQALGGHKRSH 143
                     79*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MESDNSDNSN KLCNKRRTRS SLTRDSSGHK SCFNFTAESS DNNSVILEGG SSTNHVGILR  60
IKDTNSGYFE NGAKELESDD SVDGINDNNN FGKQNLVGVS SGKIMGTSAT TSSKSKKVKG  120
HKCPYCPRVF KSGQALGGHK RSHMMGAGRG VVKLEEKPRI TRQVTVSLAG CF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45120.12e-10C2H2 family protein