PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62007938-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 225aa MW: 24537.4 Da PI: 10.0665

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62007938-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.6	2.7e-33	62	119	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers+edp++v++tYeg+H h+ AUR62007938-RA 62 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPSIVITTYEGQHCHH 119 8******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MPPNPSASSS SSEDLADKNI GKAPASAAAV ADTSTKVKKK GQKRIRQPRF AFMTKSEVDH 60 LEDGYRWRKY GQKAVKNSPF PRSYYRCTNS KCTVKKRVER SSEDPSIVIT TYEGQHCHHT 120 IGFPRSSGFL SHEGAFLGHF APPMSPHHQS RFLYQGMQFS HDNSVTRSIA QASISSATVQ 180 QAHHQQPAPS DTTDSPSSVS QQMPPLSSGE GLLGDIVPPG MRNP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	1e-60	WRKY family protein