PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62008003-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 435aa    MW: 47376.9 Da    PI: 6.6041
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62008003-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS196.61.6e-608235410275
            GRAS  10 eavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIl 103
                     +a++s+  ++++ +Larl+++ +sp g+p+qR+a+yf+eAL++  + + ++ +++ +p + s++++++++ a+k+fs +sP+  fs ++aNqaIl
  AUR62008003-RA  82 QAFESNASQQVHLILARLNQRlRSPVGKPLQRAAFYFKEALQHLTTTT-NNNSSSPRPPRLSSYEVVQTIRARKAFSGISPVSLFSTFAANQAIL 175
                     7999****************99********************999885.5555555555555699****************************** PP

            GRAS 104 eavege..ervHiiDfdisqGlQWpaLlqaLasRp.......egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     eav       +HiiDfdi+ G++W++++++L +++       + +  lRiT+++++e     e + ++e+L +fA+ l+++f++++++  ++e l
  AUR62008003-RA 176 EAVVDGtsPFIHIIDFDIGFGGHWASFMRELVDKAtdqttkmSTSIILRITAIVPEE--FGIESKLVKENLMQFARDLNLNFHIDFVLIPTFEIL 268
                     **86544699**********************999665554444779********66..7788899***************************** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleakl 275
                     +++++++ +gE+laV+l+ ++++ +  s +++s ++++L  ++++sP  vvvv++e+    +++sF   fl  +e+y+ + +s+e+ +
  AUR62008003-RA 269 SFKSMKIMEGEKLAVHLSPAVFNRF--SNNSRSGISKFLGDLRGISPSCVVVVDKEVGIdaGTASFGPTFLAGIEFYTGMIESIEVAA 354
                     *********************9999..555556679********************76554999********************9875 PP
2GRAS543.4e-17376433317374
            GRAS 317 erleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     e++ +aG+++v +s++a  qa++llr+ ++ g++v +++g+++l W+drpL+++SaWr
  AUR62008003-RA 376 EAFVAAGMRAVGFSQFADFQAECLLRRAQVAGFHVAKRHGEMMLFWHDRPLIATSAWR 433
                     67889****************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    
LCYEPTSVLD LQRSPSSPAG ATKTVTSTPP PQPPSSDTTK NNNNVDLDNL EGWDSILSEL  60
GLTDDSNSNN PKLLLSQISP SQAFESNASQ QVHLILARLN QRLRSPVGKP LQRAAFYFKE  120
ALQHLTTTTN NNSSSPRPPR LSSYEVVQTI RARKAFSGIS PVSLFSTFAA NQAILEAVVD  180
GTSPFIHIID FDIGFGGHWA SFMRELVDKA TDQTTKMSTS IILRITAIVP EEFGIESKLV  240
KENLMQFARD LNLNFHIDFV LIPTFEILSF KSMKIMEGEK LAVHLSPAVF NRFSNNSRSG  300
ISKFLGDLRG ISPSCVVVVD KEVGIDAGTA SFGPTFLAGI EFYTGMIESI EVAAASGFAG  360
GGFSVGGDCL RRIETEAFVA AGMRAVGFSQ FADFQAECLL RRAQVAGFHV AKRHGEMMLF  420
WHDRPLIATS AWRC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.14e-90GRAS family protein