PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62008318-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 242aa    MW: 25640.3 Da    PI: 5.8094
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62008318-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.5e-11167214455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  AUR62008318-RA 167 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 214
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MDPPLISEGS FSTANPSMAE IWPFNGGSGD SDGGGMLGLR MSCGSGGFVS SLIDGLLNNS  60
VVGVMNRDAS IDESTVTDQS GSRGGRKRRE NVSEDESSNI VSTTSSGNEL KESNGKRTKT  120
SSQGENDSSK AGGESNSAGG NKPADKSAEP PKDYIHVRAR RGQATDSHSL AERARREKIS  180
ERMKILQDLV PGCNKVIGKA LVLDEIINYI QSLQRQVEFL SMKLEAVNSG MVPSIGGFHS  240
KD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.15e-72bHLH family protein